Posts by [VENETO] boboviz
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1) Message boards : Science : The new Vitis vinifera project is underway (Message 3170)
Posted 14 days ago by Profile [VENETO] boboviz
Up to now, no error or invalid validation

Well done!
2) Message boards : News : Maintenance (filesystem and o.s.) (Message 3163)
Posted 18 days ago by Profile [VENETO] boboviz
What is current upgrade status?

The first (test) workunits will be out today


Great!!!
3) Message boards : News : Storage problem (again) (Message 3108)
Posted 14 Mar 2023 by Profile [VENETO] boboviz
The University have bought a new one and they planned the moving procedure. The HPC cluster should be moved this Monday (March, 6th), the other resources will follow.
I will reasonably shut down the server when needed, I will tell you when as soon as I know the date. Meanwhile the work generator will be active just a few hours a day, so very few workunits will be available.


Any news??
4) Message boards : News : Storage problem (again) (Message 3096)
Posted 2 Mar 2023 by Profile [VENETO] boboviz
Thank you all for your understanding and patience.


No problem. We are ready to restart our pc to crunch your wus!!
5) Message boards : Science : Tn-Grid future plans? (Message 3056)
Posted 12 Jan 2023 by Profile [VENETO] boboviz
Have you seen https://gene.disi.unitn.it/test/forum_thread.php?id=207 I asked a similar question and got the following answer on April 8, 2022 at 14:44:38 UTC from valterc Message 2624

The main goal right now is to finish the FANTOM-1 experiment. Alongside there will be another dataset of Vitis vinifera. We are planning to do new experiments, either with other datasets or organisms. We are also evaluating the feasibility to do something with Single-cell transcriptomics data.


Very interesting message!!
But it's april 2022, so we don't know if plas are changed.
Meantime, we crunch!
6) Message boards : Science : Tn-Grid future plans? (Message 3049)
Posted 6 Jan 2023 by Profile [VENETO] boboviz
We are at 93% of the project and ETA is 30 March 2023.
So, after that? The project is finished??
7) Message boards : Science : Crosstalk between epitranscriptomic and histone modifications in LUAD (Message 3033)
Posted 16 Dec 2022 by Profile [VENETO] boboviz
They were just a few hundreds, very fast.. The students are working with the results.


Ok.
Great that students are working on it!!
8) Message boards : Science : Crosstalk between epitranscriptomic and histone modifications in LUAD (Message 3030)
Posted 15 Dec 2022 by Profile [VENETO] boboviz
The name of our work unit will contain the string 'dfcc_e'.


Up to now, no one of these wus...
Any roadmap?
9) Message boards : Science : Crosstalk between epitranscriptomic and histone modifications in LUAD (Message 3023)
Posted 28 Nov 2022 by Profile [VENETO] boboviz
Our cpus are ready!!
10) Message boards : Science : Spinal muscular atrophy (SMA) from Mus musculus (Message 2908)
Posted 27 Sep 2022 by Profile [VENETO] boboviz
I just put a small number of the new workunits into the queue, their names contain the string _Mm_.


No one of these wus on my pcs... :-(
11) Message boards : Science : 14th International Workshop on Science Gateway at Trento (Message 2723)
Posted 14 Jun 2022 by Profile [VENETO] boboviz
14th IWSG at Trento.

There is also an old acquaintance of the boinc world, Peter Kacsuk
12) Message boards : Number crunching : Compiling for AVX-512 (Message 2451)
Posted 7 Jan 2022 by Profile [VENETO] boboviz
or you did and the avx512 app didn't provide any benefit?


Some times ago, Linus Torvalds explained his thought about Axv512: "I Hope AVX512 Dies A Painful Death" :-P
13) Message boards : Number crunching : Compiling for AVX-512 (Message 2449)
Posted 7 Jan 2022 by Profile [VENETO] boboviz
double message
14) Message boards : Number crunching : Compiling for AVX-512 (Message 2448)
Posted 7 Jan 2022 by Profile [VENETO] boboviz
I only run fma for TN-GRID. Are there BOINC projects that benefit with from AVX-512?


If i'm not wrong, no.
Up to now. there are not boinc projects with avx-512 support
15) Message boards : Number crunching : Compiling for AVX-512 (Message 2443)
Posted 6 Jan 2022 by Profile [VENETO] boboviz
Intel is abandoning avx512
16) Message boards : Science : proterna_vae64lat dataset (Message 2313)
Posted 20 May 2021 by Profile [VENETO] boboviz
I just inserted in the queue 51 genes (51*18 workunits) related to leukemia (see https://omim.org/), to be "expanded" within the proterna_vae64lat dataset.


Great!!
17) Message boards : Number crunching : FMA application for windows_x86_64 (Message 2149)
Posted 25 Dec 2020 by Profile [VENETO] boboviz
I just deployed the FMA optimized version of the application for Windows x64.


Well done, Valter!!
And... Happy Christmas
18) Message boards : News : Paper published on IEEE Transactions on Emerging Topics in Computing (Message 2010)
Posted 16 Oct 2020 by Profile [VENETO] boboviz
Well done!!
19) Message boards : Science : AMD COVID-19 HPC Fund (Message 1952)
Posted 18 Sep 2020 by Profile [VENETO] boboviz
The grant will give us access, for one year, to two AMD computational nodes, each one equipped with a AMD Epyc "Rome" and 8 AMD Radeon Instinctâ„¢ MI50 Accelerators.

Mmm, smell like an OpenCl client.... :-P
20) Message boards : News : World Gene Expansion Challenge 2020 (Message 1706)
Posted 18 Mar 2020 by Profile [VENETO] boboviz
The workunits contain the ACE2 string (not so many, around 800)

Hope in more wus in the future


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